- InstanceStore: run Instance.provide init inside the ALS context so KilocodeBootstrap (and any forkDetach work it spawns like KiloIndexing.init) can read Instance.directory. Upstream refactor moved init out of the ALS scope; kilo-main's pre-merge Instance.provide wrapped it. Without this, KiloIndexing.init silently fails with "No context found for instance".
- kilocode/agent: thread worktree through planGuard/patchAgents instead of reading Instance.worktree at agent state construction time. Agent state is built inside Effect (no ALS) via InstanceState.make — reading the ALS-backed Instance.worktree there crashed under the new architecture.
- kilocode/agent: drop the "*": "ask" from explore external_directory — defaults already provides it, and redefining here overwrites the tmp/skill allowlist via findLast().
- test/server/httpapi-instance.test.ts: revert the ported Hono-bridge tests. Upstream put the same tests in httpapi-instance.legacy.test.ts (renamed file); the port duplicated them.
- test/server/httpapi-instance.legacy.test.ts: mark the catalog test test.skip with Kilo's original rationale (/agent 500s via the bridge; the bridge is not enabled in any production client).
- test/server/httpapi-ui.test.ts: delete. Tests upstream's proxy-to-app.opencode.ai fallback that Kilo intentionally removed (src/server/routes/ui.ts kilocode_change).
- test/server/httpapi-raw-route-auth.test.ts: basic("opencode", ...) → basic("kilo", ...) to match the Kilo username default.
- test/provider/models.test.ts: skip describe block. Upstream tests assert raw-fixture passthrough but Kilo's ModelsDev.get() filters/injects providers based on Config.get(), which needs an Instance context the test doesn't provide.